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Journal Articles

Kinematic Design of Functional Nanoscale Mechanisms From Molecular Primitives

Meysam T. Chorsi, Pouya Tavousi, Caitlyn Mundrane, Vitaliy Gorbatyuk, Kazem Kazerounian, Horea Ilies
Journal: Journal of Micro and Nano-Manufacturing
Publisher: ASME
Article Type: Research-Article
J. Micro Nano-Manuf. June 2021, 9(2): 021005.
Paper No: JMNM-21-1014
https://doi.org/10.1115/1.4051472
Published Online: July 9, 2021
View Article titled, Kinematic Design of Functional Nanoscale Mechanisms From Molecular Primitives
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Topics: Design, Kinematics, Nanoscale phenomena, Molecular machines, Linkages
Proceedings Papers

Kinematic Design of Functional Nanoscale Mechanisms From Molecular Primitives

Pouya Tavousi, Meysam T. Chorsi, Caitlyn Mundrane, Vitaliy Gorbatyuk, Kazem Kazerounian, Horea Ilies
Proc. ASME. IDETC-CIE2020, Volume 1: 14th International Conference on Micro- and Nanosystems (MNS), V001T01A017, August 17–19, 2020
Publisher: American Society of Mechanical Engineers
Paper No: DETC2020-22061
https://doi.org/10.1115/DETC2020-22061
View Paper titled, Kinematic Design of Functional Nanoscale Mechanisms From Molecular Primitives
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Topics: Design, Kinematics, Nanoscale phenomena, Molecular machines, Mechanical admittance, Biomedicine, Degrees of freedom, Engineering simulation, Linkages, Simulation
Journal Articles

Synthesizing Functional Mechanisms From a Link Soup

Pouya Tavousi, Kazem Kazerounian, Horea Ilies
Journal: Journal of Mechanical Design
Publisher: ASME
Article Type: Research-Article
J. Mech. Des. June 2016, 138(6): 062303.
Paper No: MD-15-1521
https://doi.org/10.1115/1.4033394
Published Online: May 4, 2016
View Article titled, Synthesizing Functional Mechanisms From a Link Soup
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Topics: Linkages, Topology, Optimization, Mechanical admittance, Geometry
Journal Articles

Protofold II: Enhanced Model and Implementation for Kinetostatic Protein Folding

Pouya Tavousi, Morad Behandish, Horea T. Ilieş, Kazem Kazerounian
Journal: Journal of Nanotechnology in Engineering and Medicine
Publisher: ASME
Article Type: Research-Article
J. Nanotechnol. Eng. Med. August 2015, 6(3): 034601.
Paper No: NANO-15-1074
https://doi.org/10.1115/1.4032759
Published Online: March 22, 2016
View Article titled, Protofold II: Enhanced Model and Implementation for Kinetostatic Protein Folding
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Topics: Algorithms, Atoms, Chain, Computation, Graphics processing units, Proteins, Simulation, Water
Proceedings Papers

Synthesizing Functional Mechanisms From a Link Soup

Pouya Tavousi, Kazem Kazerounian, Horea Ilies
Proc. ASME. IDETC-CIE2015, Volume 5C: 39th Mechanisms and Robotics Conference, V05CT08A044, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-47311
https://doi.org/10.1115/DETC2015-47311
View Paper titled, Synthesizing Functional Mechanisms From a Link Soup
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Topics: Algorithms, Errors, Linkages, Mechanical admittance, Shapes, Topology
Proceedings Papers

An Improved Free Energy Formulation and Implementation for Kinetostatic Protein Folding Simulation

Pouya Tavousi, Morad Behandish, Kazem Kazerounian, Horea T. Ilieş
Proc. ASME. IDETC-CIE2013, Volume 6A: 37th Mechanisms and Robotics Conference, V06AT07A006, August 4–7, 2013
Publisher: American Society of Mechanical Engineers
Paper No: DETC2013-12671
https://doi.org/10.1115/DETC2013-12671
View Paper titled, An Improved Free Energy Formulation and Implementation for Kinetostatic Protein Folding Simulation
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Topics: Proteins, Simulation, Atoms, Algorithms, Biology, Molecular dynamics, Vacuum, Van der Waals forces
Proceedings Papers

GPU-Accelerated Computation of Solvation Free Energy for Kinetostatic Protein Folding Simulation

Morad Behandish, Pouya Tavousi, Horea T. Ilieş, Kazem Kazerounian
Proc. ASME. IDETC-CIE2013, Volume 2A: 33rd Computers and Information in Engineering Conference, V02AT02A009, August 4–7, 2013
Publisher: American Society of Mechanical Engineers
Paper No: DETC2013-12675
https://doi.org/10.1115/DETC2013-12675
View Paper titled, GPU-Accelerated Computation of Solvation Free Energy for Kinetostatic Protein Folding Simulation
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Topics: Computation, Graphics processing units, Proteins, Simulation, Algorithms, Atoms, Computer simulation, Computer software, Energetics, Thread